FastQCFastQC Report
Mon 25 Mar 2013
43.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 43.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 25617244
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 2010146 7.8468472252518655 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1469776 5.737447791027013 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1359429 5.306694974681898 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 979343 3.822983455987693 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 746803 2.915235534314308 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 388906 1.51814145190638 RNA PCR Primer, Index 1 (100% over 29bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 345976 1.3505590218838528 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 224925 0.8780218512186556 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 219915 0.8584647122852093 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 203491 0.7943516484443058 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 180345 0.7039984472958918 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 166764 0.6509833766661238 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 162204 0.6331828669781964 RNA PCR Primer, Index 1 (100% over 25bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 156486 0.6108619646984664 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 143118 0.5586783652449109 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 143008 0.558248966984895 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 126980 0.49568173688004846 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 123764 0.48312769320540494 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 120457 0.470218420061112 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 112395 0.4387474312225 RNA PCR Primer, Index 1 (100% over 29bp)
CGCGACCTCAGATCAGATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 107201 0.41847202610866335 RNA PCR Primer, Index 1 (100% over 32bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 104501 0.40793225063554844 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 99811 0.38962427027669333 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 93562 0.3652305454872507 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 91326 0.3565020499472933 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 90225 0.3522041637265898 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 76410 0.29827564588915184 RNA PCR Primer, Index 1 (100% over 27bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 73646 0.28748603870111866 RNA PCR Primer, Index 2 (100% over 34bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 69876 0.2727693892442138 RNA PCR Primer, Index 1 (100% over 33bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCT 69030 0.2694669262626378 RNA PCR Primer, Index 1 (97% over 35bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 68279 0.2665353072328936 RNA PCR Primer, Index 1 (100% over 25bp)
AATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCC 66109 0.2580644506489457 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 58859 0.22976320169335937 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 57384 0.22400536138860216 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 56662 0.22118694735468028 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 55503 0.21666265114233207 RNA PCR Primer, Index 1 (100% over 27bp)
ATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCA 55244 0.21565161342102218 RNA PCR Primer, Index 1 (100% over 28bp)
ATGGGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTTTGGAATTCTCG 54446 0.21253652422563488 No Hit
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 53270 0.20794586646401153 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTACATCTGGCTACTGGGTCTCTTGGAATTCTCGGGTGCCAAGGAAC 52205 0.2037885105829495 RNA PCR Primer, Index 1 (100% over 24bp)
GAATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTC 52106 0.2034020521489353 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 51782 0.2021372790921615 RNA PCR Primer, Index 1 (100% over 25bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 50160 0.1958056065672014 RNA PCR Primer, Index 1 (100% over 32bp)
TAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCAGT 50102 0.19557919657555667 RNA PCR Primer, Index 1 (100% over 30bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 47964 0.18723325584906791 RNA PCR Primer, Index 1 (100% over 30bp)
TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 46783 0.18262307998471652 RNA PCR Primer, Index 1 (100% over 31bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 46761 0.1825372003327134 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC 43476 0.1697138068404236 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 42703 0.16669630815867623 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 42516 0.16596633111664938 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 41371 0.16149668559193955 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 41315 0.16127808284138606 RNA PCR Primer, Index 2 (100% over 34bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 41221 0.16091114251009983 RNA PCR Primer, Index 1 (100% over 32bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 40211 0.15696848575904573 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 39377 0.15371286622401692 RNA PCR Primer, Index 1 (100% over 28bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCTA 38832 0.15158539302666593 RNA PCR Primer, Index 2 (97% over 36bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 38062 0.14857960520655542 RNA PCR Primer, Index 1 (100% over 27bp)
ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 37994 0.14831415900945474 RNA PCR Primer, Index 1 (100% over 30bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 36369 0.1419707756228578 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGAACTGAATTCCATAGGCTGTTGGAATTCTCGGGTGCCAAGGAACT 35813 0.13980036259950523 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 34025 0.13282068906397582 RNA PCR Primer, Index 1 (100% over 26bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 33502 0.13077909551862799 RNA PCR Primer, Index 1 (100% over 26bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 33363 0.13023649226278985 No Hit
TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG 33358 0.13021697416006187 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 32558 0.1270940777235834 RNA PCR Primer, Index 1 (100% over 26bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 32283 0.12602058207354389 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 32005 0.12493537556186762 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 31808 0.1241663623143848 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 31680 0.12366669888454823 No Hit
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 30257 0.11811184684816212 RNA PCR Primer, Index 1 (100% over 28bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 29780 0.11624981984791183 No Hit
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 29779 0.11624591622736621 RNA PCR Primer, Index 1 (100% over 31bp)
TGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 29433 0.11489526351858928 RNA PCR Primer, Index 1 (100% over 27bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 28893 0.1127873084239663 RNA PCR Primer, Index 1 (100% over 27bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 28800 0.11242427171322567 No Hit
AGCTACATTGTCTGCTGGGTTTTGGAATTCTCGGGTGCCAAGGAACTCC 28622 0.1117294272561092 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 28327 0.11057785919515775 RNA PCR Primer, Index 1 (100% over 27bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 27801 0.10852455478817316 No Hit
ATTAATGTGAATTGCAGGACACATGGAATTCTCGGGTGCCAAGGAACTC 27446 0.10713876949448582 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATATGGAATTCTCGGGTGCCAAGGAACTCCA 27367 0.10683038347138356 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 25899 0.10109986851044556 RNA PCR Primer, Index 1 (100% over 25bp)
AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 25704 0.1003386625040539 RNA PCR Primer, Index 1 (100% over 29bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 26078975 27.540182 335.3591 26
TTCTC 25781055 27.244333 334.78848 28
ATTCT 25806385 26.14445 321.63147 27
TGCCA 26389150 25.819221 310.4345 36
GCCAA 23795710 24.268353 323.66415 37
CCAAG 23730895 24.202251 323.81104 38
TCTCG 25762245 24.181181 297.51627 29
GAACT 25216090 23.65224 297.2874 43
AACTC 20083130 23.059761 363.82428 44
GAATT 26509345 22.868961 274.4151 25
CTCGG 25559845 21.309355 265.32703 30
GTGCC 24450115 20.384169 264.6749 35
GGAAT 26063400 19.970863 244.73296 24
ACTCC 16626365 19.913328 379.36777 45
TGGAA 25714065 19.703188 244.80743 23
CAAGG 23501680 19.579958 264.54175 39
GGAAC 22824565 19.015833 264.31598 42
AAGGA 23335145 18.63804 253.71953 40
AGGAA 23106710 18.455584 253.74428 41
TCGGG 25372560 17.28015 216.68948 31
CGGGT 25341070 17.258701 216.3589 32
GGTGC 25032705 17.048689 216.49591 34
GGGTG 25287925 14.069141 176.90155 33
CTCCA 9635380 11.540256 101.89838 45
CCAGT 8468795 8.285893 99.62547 7
TTGGA 11084395 8.148052 143.88232 22
TCCAG 8187075 8.010258 69.079956 45
GACTG 6985520 5.583257 169.7506 11
CAGTC 5599890 5.4789486 34.88714 44
TGTTG 7559035 5.3306994 148.02507 17
TCAGA 5657680 5.3068027 205.7407 8
TAGCT 5832750 5.248606 189.99196 1
TATCA 4886600 5.1603966 223.46696 6
GTTGA 6907975 5.0779986 145.5928 18
TGATG 6898120 5.070754 155.68596 14
CAGAC 4948320 5.0466065 216.09277 9
ACTGA 5333860 5.0030656 198.7396 12
TTATC 4933845 4.9984784 214.38406 5
CTTAT 4786575 4.8492794 214.25679 4
AGACT 5086385 4.770938 199.09808 10
ATCAG 5085480 4.770089 198.8282 7
CTGAT 5296060 4.765665 190.78021 13
AGTCA 4992745 4.683106 33.457134 45
AGCTT 5064015 4.5568585 189.96455 2
CTGGA 5584840 4.4637475 56.198597 23
GCTTA 4785490 4.306227 189.90988 3
ATGGA 5494540 4.2101455 69.94854 22
ATGTT 4865920 4.0270634 174.85538 16
TCACC 3185385 3.8151221 36.233513 45
GTCAC 3798090 3.7160623 30.334354 45
GATGT 5025995 3.6945696 155.60757 15
GTGGA 5172125 3.3769848 27.02697 20
CTTGG 4381045 3.3592525 41.83832 23
CACCT 2548960 3.0528786 30.383139 45
TTGAC 3333610 2.9997525 114.40532 19
AGAAC 2920385 2.855345 99.379616 15
TGACT 3051800 2.7461653 100.02412 20
AACTG 2878965 2.7004178 94.17943 17
CTGTT 2996570 2.586849 89.341995 19
AAGAA 2694910 2.5260365 95.48125 14
ACTGG 3105865 2.4823985 52.191235 22
CTGCC 2419015 2.4687634 103.658516 4
AAGCT 2623170 2.4604867 95.344795 1
ACTTG 2724085 2.4512706 42.170307 22
ACTGT 2634000 2.3702078 89.824104 18
GTTGG 3761690 2.356238 66.38282 21
AGCTG 2906455 2.3230176 80.934586 2
CAGTT 2531885 2.2783194 91.496605 8
ACCTA 1959015 2.2493715 20.904531 45
TTGAA 2600170 2.2431028 88.095245 11
GCCAG 2561525 2.2260482 88.588394 6
TTTGG 3113340 2.1955554 42.557617 21
AGTTG 2986665 2.1954741 74.68328 9
GCTGC 2364520 1.9713104 84.30518 3
GAAGA 2465020 1.9688387 81.24343 13
TGAAG 2548855 1.9530388 78.173775 12
GTAGT 2442055 1.7951355 53.305683 5
GATGG 2724405 1.7788188 50.234764 21
GACTT 1928405 1.735277 41.887238 21
AGTAG 2145755 1.6441668 55.276966 7
TAGTA 1799025 1.5519748 62.40472 6
CCTAG 1562470 1.528725 12.234167 45
GTTTG 2167030 1.528209 39.05182 20
TTGAT 1809605 1.4976394 57.976 19
CGTGG 2190570 1.491902 13.921513 19
GTAGA 1927975 1.4772947 38.590862 8
TAGTT 1719475 1.4230473 48.168964 18
AGGTA 1818850 1.3936787 57.63744 3
CCTGG 1666780 1.3896016 7.4829736 23
GGTAG 2055740 1.342234 47.736927 4
CATGG 1674185 1.3381118 8.107469 23
TTGTA 1595640 1.3205608 50.312244 13
TGTGG 2088495 1.3081863 11.309943 20
CTAGC 1327755 1.2990793 8.905022 45
TGAGG 1979940 1.2927426 47.434532 1
CCGTG 1517690 1.2653047 15.990455 18
ATAGT 1465910 1.2646046 50.91736 17
TGTAT 1515040 1.2538558 48.41009 14
AGTGG 1919720 1.2534238 22.448421 6
AGCTA 1331800 1.2492045 18.469007 1
ATTGT 1506430 1.2467301 41.327637 12
GATTG 1689485 1.2419273 37.204792 11
GCTTG 1618485 1.2410051 19.979145 20
GAGGT 1887950 1.2326807 49.288544 2
TCCCG 1203210 1.2279546 18.833046 12
AGTTT 1473650 1.2196012 36.821445 19
AGATT 1409915 1.216299 42.996414 10
TATAG 1394540 1.2030355 49.23741 16
GTATA 1392075 1.200909 49.469337 15
GCTGT 1537635 1.1790118 11.034088 20
TAGAT 1357750 1.1712977 42.859783 9
TCACA 1018975 1.1700029 44.11345 2
GGCTA 1426605 1.1402304 27.245037 9
CAGGA 1365015 1.1372352 22.577078 12
GTTCC 1195780 1.1223933 21.941648 15
GCCTG 1327325 1.1065965 14.541047 17
TGGCT 1429055 1.095756 26.44641 8
CTGTG 1394710 1.0694213 9.348374 21
AATCC 929165 1.0668817 23.783909 8
TCTGG 1377890 1.0565243 13.066317 8
ATTGC 1159940 1.0437733 19.929323 2
GCACT 1054885 1.0321025 20.824728 5
AGGCT 1286825 1.0285097 18.641794 18
ACAGT 1084465 1.0172088 31.967703 4
CAGTG 1232575 0.98514974 27.40601 5
GGCTT 1281585 0.98268056 20.332474 19
CCTGT 1029640 0.96644944 16.52031 18
CACAG 940415 0.9590941 35.765537 3
TTGCA 1060040 0.95387805 19.703316 3
GCTAC 955295 0.93466324 19.256542 2
TTCAA 884335 0.9338843 27.615086 1
AAGTA 1002375 0.901367 23.675774 4
GCTAA 951895 0.8928604 33.072052 10
TTCAC 804855 0.88657826 37.3082 1
CCCGT 866010 0.8838199 8.064923 14
CTAAG 917175 0.8602938 32.14021 11
TTCCC 743160 0.8538959 9.545814 12
GACCT 857935 0.839406 8.674382 4
CACTT 759295 0.8363922 22.900057 6
TGAAT 965475 0.8328916 9.941119 9
CCAGG 950605 0.82610655 18.458254 11
ACCAC 647395 0.80823904 9.8169775 6
CACGT 823260 0.80547994 7.666665 8
AGTTC 894415 0.8048403 29.731491 14
AAGTT 926015 0.79885054 28.989738 13
CTACT 724850 0.7984497 18.195671 13
TAAGT 909535 0.7846335 29.501774 12
CAAGT 829185 0.77776074 24.618158 3
CACCA 618800 0.7725397 10.036421 5
ACATG 815760 0.7651683 8.777105 22
ATAGG 996755 0.7637552 23.557625 16
AAAGC 779035 0.76168513 11.772188 14
ACATC 659430 0.75716776 19.149824 5
GCTAT 834950 0.7513305 5.921243 44
AAGCA 766195 0.74913114 11.8317995 15
AGGAT 973420 0.74587494 20.255333 13
CGTTC 793975 0.7452475 7.7386785 10
TTCTG 851405 0.73499244 8.840752 16
TAGGC 918825 0.73438144 18.312092 17
GTGGT 1171635 0.73388577 8.093209 15
CTACA 630995 0.72451824 22.661686 3
TGCTG 940310 0.7210012 7.945987 16
CCACG 666480 0.7090093 8.228464 7
GGACT 880995 0.7041454 14.272099 4
CCCAA 556615 0.69490486 17.052267 10
ATCTG 764750 0.688161 15.245856 7
GTAAT 796980 0.6875351 22.73728 6
TTTTG 861455 0.6839622 7.8980436 14
CTCTG 726460 0.6818762 9.623416 22
CCCGG 750465 0.6802829 15.717389 13
TCCGT 717895 0.67383677 18.080687 17
GGCCT 807450 0.6731746 14.60182 16
ATTCC 602235 0.6633847 11.427182 1
ACGTT 731530 0.65826803 6.9863605 9
GTGGC 961880 0.65509474 24.26324 7
TCCTT 617100 0.6521253 9.9488535 11
CTATC 590965 0.65097034 7.2920375 45
TTCCG 691885 0.64942306 19.597706 16
CCATA 563250 0.64673233 10.866509 2
ATCCC 537995 0.6443543 20.482632 8
CATTG 702465 0.6321138 7.1507406 6
AATTG 732240 0.6316855 6.7932177 11
CAGAA 645150 0.63078195 16.60719 15
CTGAA 668490 0.6270317 6.454376 8
TGCAC 640320 0.62649095 21.224277 4
ACCTG 638145 0.62436295 8.094129 22
CCGGC 686930 0.62268955 15.797345 14
TTCCA 563575 0.6207992 10.677862 2
TATGG 842420 0.6192564 7.4780855 22
TCAAG 659980 0.6190495 24.522402 2
AGTAA 685925 0.6168052 23.55711 5
TTGTC 713085 0.61558485 18.037554 9
ATCCA 535820 0.61523676 23.561241 9
GGATA 797185 0.61083627 20.117188 14
TACTG 677435 0.60959053 14.908054 14
AGCAG 731300 0.609268 10.0624695 16
AACAT 544155 0.5989945 11.352309 1
CTGTA 664015 0.59751457 7.12771 19
CGGCC 658040 0.5965013 15.749013 15
TGGTG 948925 0.59438527 5.5308723 18
CATCT 538710 0.5934095 18.166351 6
TAGAA 652410 0.5866675 9.250738 10
GATAG 762330 0.584129 20.682436 15
TTGTG 819615 0.57799983 7.848795 19
ATACC 502895 0.5774318 6.4338436 19
TAATC 544420 0.5749238 21.826168 7
GACAT 609675 0.57186425 7.83382 21
CCACC 437670 0.56995475 10.385131 4
TACAT 539025 0.56922656 20.694704 4
CAACG 557575 0.5686498 12.422916 1
GGTCT 739765 0.5672294 12.443676 19
CTGTC 604105 0.5670302 11.148741 12
CTTGT 655165 0.5655843 18.024153 8
CTGGC 674900 0.5626671 14.034755 9
CCAAA 466650 0.55851984 14.273955 11
GGGCT 818660 0.55755377 6.2004595 18
CTGGG 815080 0.55511564 11.1825695 16
GTGCT 720440 0.55241156 7.8775034 15
ACATT 523075 0.55238295 10.994396 2
TATTG 664050 0.5495716 14.918569 1
AGCAC 534715 0.54533577 9.000539 15
CTCCT 470885 0.5410501 10.76796 10
TCGGT 703920 0.5397445 7.9829025 15
GTCCC 528380 0.5392464 17.770247 11
GCAGC 611490 0.5314046 10.339883 17
TTTGT 666830 0.5294375 10.784705 12
AAAGT 585365 0.5263785 8.359611 6
GAATC 560350 0.5255983 11.552123 6
CGGAA 618740 0.5154909 10.274053 4
CTCAG 525955 0.5145959 7.651037 7
TGAGA 671245 0.5143359 5.1626835 2
CGACC 479270 0.5098531 8.619627 3
CTTTT 520210 0.50560004 9.303635 13
TCTCT 474405 0.5013312 13.25595 21
TGGAC 626995 0.50113297 13.950705 3
AGGTT 671435 0.49356663 7.7566557 10
CAAAG 499755 0.488625 10.981063 1
ACGGA 585830 0.48807263 10.6819935 3
TCCCA 406985 0.48744425 14.284602 9
GTCTC 509605 0.47832978 12.453679 20
CCCAT 397030 0.47552112 10.761996 1
CAGCT 483460 0.47301868 12.560556 18
CACTA 411290 0.47224957 6.037142 15
TAGTG 639380 0.47000325 5.496361 13
AGAAT 522015 0.46941215 8.611266 4
ACCTC 391565 0.46897575 10.191133 5
TCGCT 498775 0.46816447 5.2948976 11
TGTCC 497715 0.4671695 15.899472 10
AGAAA 497355 0.4661888 8.606304 11
GTCAG 581570 0.4648265 13.711583 13
AAAGA 495655 0.46459532 8.983115 2
TATCT 457925 0.4639238 6.4889026 45
AGACC 454195 0.46321645 5.0660214 4
CAGAT 483495 0.4535097 7.292958 9
AAAAG 483380 0.4530895 11.412844 13
TCCAT 410920 0.45264393 6.955217 14
TCAGT 500115 0.45002902 5.435073 12
CAAAA 391175 0.4488438 13.99376 12
TAGGT 609165 0.44779244 7.3442154 9
GAAAG 560205 0.44744185 7.4299855 12
ATTCA 418790 0.44225484 10.988478 4
GAAGG 643515 0.43796828 10.990824 17
CCTTT 408575 0.4317648 9.920086 12
ATAAA 406865 0.42936578 9.449016 4
GTAGG 655685 0.4281099 6.910438 8
TCTCC 372135 0.42758563 10.941407 9
AAACA 371990 0.42683047 11.687223 4
GTTGT 600765 0.42366487 7.5418615 18
TGACA 449840 0.4219419 7.264479 20
AGAAG 525665 0.41985437 13.461007 16
CATAA 380030 0.41832912 9.788088 3
GTAAA 464185 0.41740966 9.237983 2
TGGGT 665105 0.41660678 10.265603 17
GAGTC 509915 0.40755543 13.7348995 11
ATCAC 349130 0.40087643 5.5420556 1
AACGC 386915 0.39460015 9.914455 8
GTCGG 578570 0.39403892 7.160558 14
CGCTG 470930 0.39261636 8.06423 10
TGGAG 597440 0.3900806 11.31014 9
TCCAC 325425 0.38976014 9.254355 3
CAGCA 380770 0.38833308 8.257098 4
TAAAG 431740 0.3882341 8.044865 5
CACAT 337330 0.38732755 5.439797 3
AAGGC 464840 0.38727227 9.770225 18
TGTAA 447720 0.38623706 8.870496 1
CGACT 390300 0.38187063 6.08938 13
ACTAC 329705 0.3785724 5.839529 16
TAAAC 343205 0.37779292 11.201955 3
CCTCA 314400 0.37655556 9.221469 6
CATTC 341235 0.37588328 11.588421 3
GTTCT 433600 0.37431386 8.532341 15
CGGTG 548740 0.37372297 7.8040795 16
TGTTT 470695 0.3737138 6.4699016 19
GGAGT 568850 0.37141362 11.291338 10
CCCCG 331245 0.36756763 5.8502674 10
CATAG 390365 0.36615542 7.591263 16
TCAAC 317605 0.36467898 11.169195 6
GGTTG 572965 0.35889238 6.703776 11
GGGTC 526680 0.35869884 11.044779 18
AACGG 426565 0.35538417 10.609074 2
CATCC 296175 0.35472754 12.071115 7
TGGGC 520010 0.35415626 6.5502853 17
GATCA 374280 0.35106796 7.3520427 11
TCTGT 405635 0.35017252 5.531757 17
TGACC 357715 0.34998938 7.8471727 20
CCGAC 317595 0.33786133 6.8444495 12
GATTT 403960 0.33431962 6.0515175 15
ATCCT 302790 0.33353463 5.7963214 8
GAGAA 415265 0.33167672 5.210118 3
TGAGT 417880 0.30718032 6.7165036 19
TTTCC 284470 0.30061588 5.185212 2
TCCCC 239285 0.2989408 6.498572 9
TAATT 306615 0.29779854 5.682755 7
AGATC 315770 0.2961866 7.1368046 10
AGCCC 273310 0.2907504 5.1174817 10
ACGCT 294875 0.28850657 9.318153 9
GGTGA 437640 0.28574398 6.131315 17
TTCAG 312575 0.28127092 6.089962 10
TGTGC 366540 0.28105175 7.763652 14
GAAGC 333190 0.27759063 5.506686 19
TGTCG 349645 0.2680972 7.9146543 13
TTGGG 408795 0.25605997 6.0930176 16
GCGAC 291500 0.25332293 6.886921 2
GTGAG 381730 0.24923919 5.8078403 18
CCCGA 233500 0.24840005 5.6550045 11
CGCGA 262645 0.228247 6.89443 1
CCGTA 216920 0.21223512 5.082289 5
TAGCA 193400 0.18140575 5.573838 1